dc.contributor.author | Jęcz, Paulina | |
dc.contributor.author | Lach, Jakub | |
dc.contributor.author | Strapagiel, Dominik | |
dc.contributor.author | Matera-Witkiewicz, Agnieszka | |
dc.contributor.author | Stączek, Paweł | |
dc.date.accessioned | 2021-12-06T18:04:23Z | |
dc.date.available | 2021-12-06T18:04:23Z | |
dc.date.issued | 2021 | |
dc.identifier.citation | Lach, J.; Jęcz, P.; Strapagiel, D.; Matera-Witkiewicz, A.; Stączek, P. The Methods of Digging for “Gold” within the Salt: Characterization of Halophilic Prokaryotes and Identification of Their Valuable Biological Products Using Sequencing and Genome Mining Tools. Genes 2021, 12, 1756. https:// doi.org/10.3390/genes12111756 | pl_PL |
dc.identifier.issn | 2073-4425 | |
dc.identifier.uri | http://hdl.handle.net/11089/39971 | |
dc.description.abstract | Halophiles, the salt-loving organisms, have been investigated for at least a hundred years.
They are found in all three domains of life, namely Archaea, Bacteria, and Eukarya, and occur in
saline and hypersaline environments worldwide. They are already a valuable source of various
biomolecules for biotechnological, pharmaceutical, cosmetological and industrial applications. In the
present era of multidrug-resistant bacteria, cancer expansion, and extreme environmental pollution,
the demand for new, effective compounds is higher and more urgent than ever before. Thus, the
unique metabolism of halophilic microorganisms, their low nutritional requirements and their ability
to adapt to harsh conditions (high salinity, high pressure and UV radiation, low oxygen concentration,
hydrophobic conditions, extreme temperatures and pH, toxic compounds and heavy metals) make
them promising candidates as a fruitful source of bioactive compounds. The main aim of this review
is to highlight the nucleic acid sequencing experimental strategies used in halophile studies in concert
with the presentation of recent examples of bioproducts and functions discovered in silico in the
halophile’s genomes. We point out methodological gaps and solutions based on in silico methods
that are helpful in the identification of valuable bioproducts synthesized by halophiles. We also
show the potential of an increasing number of publicly available genomic and metagenomic data for
halophilic organisms that can be analysed to identify such new bioproducts and their producers. | pl_PL |
dc.description.sponsorship | Publication’s printing cost was co-financed by the European Union from the European
Social Fund under the "InterDOC-STARt" project (POWR.03.02.00-00-I033/16-00). | pl_PL |
dc.language.iso | en | pl_PL |
dc.publisher | MDPI | pl_PL |
dc.relation.ispartofseries | Genes;12, 1756 | |
dc.rights | Uznanie autorstwa-Użycie niekomercyjne 4.0 Międzynarodowe | * |
dc.rights.uri | http://creativecommons.org/licenses/by-nc/4.0/ | * |
dc.subject | halophiles | pl_PL |
dc.subject | biomolecules | pl_PL |
dc.subject | metagenomics | pl_PL |
dc.subject | bioinformatics | pl_PL |
dc.subject | genome mining | pl_PL |
dc.subject | biodiversity | pl_PL |
dc.subject | hypersaline environments | pl_PL |
dc.title | The Methods of Digging for “Gold” within the Salt: Characterization of Halophilic Prokaryotes and Identification of Their Valuable Biological Products Using Sequencing and Genome Mining Tools | pl_PL |
dc.type | Article | pl_PL |
dc.page.number | 18 | pl_PL |
dc.contributor.authorAffiliation | Department of Molecular Microbiology, Faculty of Biology and Environmental Protection, University of Lodz, 93-338 Lodz, Poland | pl_PL |
dc.contributor.authorAffiliation | Department of Molecular Microbiology, Faculty of Biology and Environmental Protection, University of Lodz, 93-338 Lodz, Poland | pl_PL |
dc.contributor.authorAffiliation | Biobank Lab, Department of Molecular Biophysics, Faculty of Environmental Protection, University of Lodz, 93-338 Lodz, Poland | pl_PL |
dc.contributor.authorAffiliation | Biobank Lab, Department of Molecular Biophysics, Faculty of Environmental Protection, University of Lodz, 93-338 Lodz, Poland | pl_PL |
dc.contributor.authorAffiliation | Screening Laboratory of Biological Activity Tests and Collection of Biological Material, Faculty of Pharmacy, Wroclaw Medical University, 50-368 Wroclaw, Poland | pl_PL |
dc.contributor.authorAffiliation | Department of Molecular Microbiology, Faculty of Biology and Environmental Protection, University of Lodz, 93-338 Lodz, Poland | pl_PL |
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dc.contributor.authorEmail | paulina.jecz@biol.uni.lodz.pl | pl_PL |
dc.contributor.authorEmail | Jakub.lach@biol.uni.lodz.pl | pl_PL |
dc.contributor.authorEmail | dominik.strapagiel@biol.uni.lodz.pl | pl_PL |
dc.contributor.authorEmail | agnieszka.matera-witkiewicz@umed.wroc.pl | pl_PL |
dc.contributor.authorEmail | pawel.staczek@biol.uni.lodz.pl | pl_PL |
dc.identifier.doi | 10.3390/genes12111756 | |
dc.discipline | nauki biologiczne | pl_PL |